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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs9481863 chr6:119118394 A/G 0.000273 483 16.23 14.25 21.77 KM Plot
THCA rs9481878 chr6:119273375 G/A 0.000299 488 16.37 14.27 21.77 KM Plot
THCA rs9481879 chr6:119280716 C/A 0.000297 489 16.37 14.28 21.77 KM Plot
THCA rs9483514 chr6:133228716 G/A 6.55E-5 486 15.63 16.2 17.85 KM Plot
THCA rs9489220 chr6:117875854 G/A 5.56E-5 488 15.93 15.77 12.48 KM Plot
THCA rs9489530 chr6:119118427 C/T 0.00026 483 16.22 14.27 21.77 KM Plot
THCA rs9493435 chr6:133088205 A/G 6.32E-7 490 15.63 17.18 17.77 KM Plot
THCA rs9493436 chr6:133088275 T/C 8.61E-7 489 15.67 17.13 17.77 KM Plot
THCA rs9493437 chr6:133088405 A/T 1.11E-7 488 15.65 17.13 17.77 KM Plot
THCA rs949546 chr1:48806924 C/A 7.66E-5 490 17.68 14.78 14.78 KM Plot
THCA rs9505293 chr6:7870593 A/C 8.66E-15 490 7.07 14.92 15.97 KM Plot
THCA rs951630 chr3:56550225 C/T 6.07E-5 488 16.63 13.5 8.97 KM Plot
THCA rs9559850 chr13:111245695 G/A 0.000278 481 15.2 18.38 14.7 KM Plot
THCA rs9567593 chr13:46466990 T/C 4.55E-6 477 15.7 16.73 13.1 KM Plot
THCA rs9587535 chr13:108882748 A/G 7.65E-9 482 15.28 17.7 13.77 KM Plot